Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922775.1_cds_XP_016471532.1_63863
CDS Infomation

[gene=LOC107793652] [db_xref=GeneID:107793652] [protein=fe-S cluster assembly factor HCF101, chloroplastic-like isoform X2] [protein_id=XP_016471532.1] [location=join(19633..19705,19794..19916,21032..21159,21239..21289,21735..21890,22238..22381,22452..22594,23149..23218,23317..23412,23549..23638,24011..24064,24483..24606,24857..24981,25194..25316,25898..25966)] [gbkey=CDS]
Sequence

ATGACACAGATTTTTCAAGCTCCATCTTCTTCTACTCTCACTTTTCATCAATTTACATCA
CAACCCAAAGCAGGATTATATGTAGCTGAGAAGTCTGGTTCTTGCCTTTTGTCTCAAAGA
CATGTTAGGAACTTGAACGTTTCGTATACTTATTCAAATTTGAGCTCATTTACAGCTAAG
GTTGCTTCAAATGGAGTGTCAGGTCAAACAGCTGAGTCTGAAGTACTTAAAGCCCTATCC
CAGATTATCGATCCTGATTTTGGGACTGACATCGTCTCCTGTGGATTTGTGAAGGACCTC
TTGGTTGATGAGGGTTTAGGAGAGGTGTCATTCCGGTTAGAGCTTACAACACCAGCATGT
CCGATCAAGGACATGTTTGAGCAGAAGGCGAACGAGGTGGTTGCTGCACTTCCTTGGGTT
AAAAAGGTCAATGTGACAATGTCAGCCCAACCAGCAAAACCTATGTATGCCGGACAGCTT
CCCGCCGGGCTACAAACAATCTCCAATATAATTGCTGTTTCCAGTTGCAAGGGAGGGGTA
GGTAAATCAACTGTAGCGGTCAACCTCGCTTACACTTTGGCTGATATGGGAGCTAGAGTT
GGTATATTTGATGCAGACGTATATGGTCCTAGTTTGCCAACAATGGTGTCCCCAGAAAAC
CGGATACTTGAAATGAATGCAGAGAAAAGAACCATTATTCCAACTGAATACATGGGTGTT
AAGTTGGTATCTTTTGGATTTGCTGGGCAAGGGCGTGCAATTATGCGAGGTCCTATGGTG
TCTGGGGTCATCAACCAACTTTTGACTACTACAGAATGGGGAGAATTGGACTACCTTGTT
ATTGACATGCCCCCTGGAACTGGTGACATTCAACTTACTTTATGTCAGGTTGTTCCTTTG
ACTGCTGCAGTTATTGTTACTACACCTCAAAAGCTAGCATTTATAGATGTAGCAAAGGGT
GTCCGCATGTTCTCAAAGCTTAAGGTTCCTTGCGTTGCCGTAGTTGAGAACATGTGCCAC
TTCGATGCTGATGGAAAACGTTACTACCCCTTCGGCAGGGGTTCAGGGTCTCAGGTTGTC
CAGCAGTTCGGAATCCCCCATCTATTTGATCTCCCTATCCAACCAACTCTATCTGCTTCT
GGAGATAGTGGAATGCCTGAAGTGGTAGCTGATCCTCAAGGTGAAGTTTCCAGAACGTTC
CAAGAGTTAGGCGTGTGCGTAGTACAACAGTGTGCCAAGATTCGTCAACAAGTATCAACT
GCAGTGAGTTATGATAGATCTATCAAGGCGATCAAGGTCAAAGTACCTGATTCCGATGAA
GAGTTTTATTTGCACCCTGCAACTGTAAGAAGAAATGATCGATCTGCGCAAAGTGTGGAT
GAGTGGACGGGTGAACAGAAACTGCAATATTCTGATATCCTAGACGACATTGAACCTGAA
GAGATTCGGCCATTAGGAAACTACGCTGTGGAAATAACATGGCCAGATGGATTTAACCAG
ATAGCTCCTTATGACCAGCTGCAAATGATGGAGCGCTTGGTTGAAGTTCCTCAACTTACT
CCTGCATAG

Peptide Sequence

PEP ID

XP_016471532.1
PEP Infomation

PREDICTED: fe-S cluster assembly factor HCF101, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MTQIFQAPSSSTLTFHQFTSQPKAGLYVAEKSGSCLLSQRHVRNLNVSYTYSNLSSFTAK
VASNGVSGQTAESEVLKALSQIIDPDFGTDIVSCGFVKDLLVDEGLGEVSFRLELTTPAC
PIKDMFEQKANEVVAALPWVKKVNVTMSAQPAKPMYAGQLPAGLQTISNIIAVSSCKGGV
GKSTVAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPENRILEMNAEKRTIIPTEYMGV
KLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPL
TAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGSQVV
QQFGIPHLFDLPIQPTLSASGDSGMPEVVADPQGEVSRTFQELGVCVVQQCAKIRQQVST
AVSYDRSIKAIKVKVPDSDEEFYLHPATVRRNDRSAQSVDEWTGEQKLQYSDILDDIEPE
EIRPLGNYAVEITWPDGFNQIAPYDQLQMMERLVEVPQLTPA

Transcript Sequence

Gene sequence data has not been registered.